You will need to get some partitioning software for the Amiga that can mark bad sectors and tracks so they get skipped when the drive is used
Can you name any of thoughs programs?

If I do format the disk and copy onto it I take it there will still be a error?
unless I use a partition program?

I have a old copy of shadow warriors which had hard track errors all over the the disk yet still the game played fine. Where the drives in the a500 and a1200 different?

Also how do I get my amiga to read zip files? I put adf blitzer on the disk in zip format and used the pc0 driver I could then access the disk but it said space was used but the disk is empty in the amiga window?

I got james bond to work by using the enhanced mode in the boot options.
My alien breed 2 aga disk 3 works fine so I can play from level 5 onwards.